Most-cited papers on rrna sequencing microbiota composition actual

Ranked by citation count via OpenAlex. Citations update on a rolling basis; list regenerates every 24h.

1. The Pervasive Effects of an Antibiotic on the Human Gut Microbiota, as Revealed by Deep 16S rRNA Sequencing

   2008 · PLoS Biology · Dethlefsen, Les, Huse, S. M., Sogin, Mitchell L. et al.

   2,336 cited

2. Comparison of two next-generation sequencing technologies for resolving highly complex microbiota composition using tandem variable 16S rRNA gene regions

   2010 · Nucleic Acids Research · Claesson, Marcus J., Wang, Qiong, O’Sullivan, Órla et al.

   966 cited

3. Comparison between 16S rRNA and shotgun sequencing data for the taxonomic characterization of the gut microbiota

   2021 · Scientific Reports · Durazzi, Francesco, Sala, Claudia, Castellani, Gastone et al.

   628 cited

4. Comparison of the Fecal Microbiota of Healthy Horses and Horses with Colitis by High Throughput Sequencing of the V3-V5 Region of the 16S rRNA Gene

   2012 · PLoS ONE · Costa, Márcio, Arroyo, Luis G., Allen‐Vercoe, Emma et al.

   425 cited

5. Variations in gut microbiota and fecal metabolic phenotype associated with depression by 16S rRNA gene sequencing and LC/MS-based metabolomics

   2017 · Journal of Pharmaceutical and Biomedical Analysis · Yu, Meng, Jia, Hong‐Mei, Zhou, Chao et al.

   372 cited

6. Full-length 16S rRNA gene amplicon analysis of human gut microbiota using MinION™ nanopore sequencing confers species-level resolution

   2021 · BMC Microbiology · Matsuo, Yoshiyuki, Komiya, Shinnosuke, Yasumizu, Yoshiaki et al.

   347 cited

7. The Impact of Different DNA Extraction Kits and Laboratories upon the Assessment of Human Gut Microbiota Composition by 16S rRNA Gene Sequencing

   2014 · PLoS ONE · Kennedy, Nicholas A., Walker, Alan W., Berry, Susan H. et al.

   323 cited

8. 16S rRNA amplicon sequencing identifies microbiota associated with oral cancer, human papilloma virus infection and surgical treatment

   2016 · Oncotarget · Guerrero‐Preston, Rafael, Godoy‐Vitorino, Filipa, Jedlicka, Anne et al.

   313 cited

9. Does the human placenta delivered at term have a microbiota? Results of cultivation, quantitative real-time PCR, 16S rRNA gene sequencing, and metagenomics

   2019 · American Journal of Obstetrics and Gynecology · Theis, Kevin R., Romero, Roberto, Winters, Andrew D. et al.

   255 cited

10. High-throughput 16S rRNA gene sequencing reveals alterations of intestinal microbiota in myalgic encephalomyelitis/chronic fatigue syndrome patients

    2013 · Anaerobe · Frémont, Marc, Coomans, D., Massart, Sébastien et al.

    220 cited

11. Alterations of Gut Microbiota in Patients With Irritable Bowel Syndrome Based on 16S rRNA-Targeted Sequencing: A Systematic Review

    2019 · Clinical and Translational Gastroenterology · Duan, Ruqiao, Zhu, Shiwei, Wang, Ben et al.

    187 cited

12. Comparison of the fecal microbiota of dholes high-throughput Illumina sequencing of the V3–V4 region of the 16S rRNA gene

    2016 · Applied Microbiology and Biotechnology · Wu, Xiaoyang, Zhang, Honghai, Chen, Jun et al.

    170 cited

13. Ontogenetic Characterization of the Intestinal Microbiota of Channel Catfish through 16S rRNA Gene Sequencing Reveals Insights on Temporal Shifts and the Influence of Environmental Microbes

    2016 · PLoS ONE · Bledsoe, Jacob W., Peterson, Brian C., Swanson, Kelly S. et al.

    163 cited

14. 16S rRNA gene sequencing reveals altered composition of gut microbiota in individuals with kidney stones

    2018 · Urolithiasis · Tang, Ruiqiang, Jiang, Yonghua, Tan, Aihua et al.

    158 cited

15. A pilot study and case reports on endometrial microbiota and pregnancy outcome: An analysis using 16S rRNA gene sequencing among IVF patients, and trial therapeutic intervention for dysbiotic endometrium

    2018 · Reproductive Medicine and Biology · Kyono, Koichi, Hashimoto, T., Kikuchi, S et al.

    147 cited

16. High-throughput 16S rRNA gene sequencing reveals alterations of mouse intestinal microbiota after radiotherapy

    2015 · Anaerobe · Kim, Young Suk, Kim, Jinu, Park, Soo-Je

    137 cited

17. A Comparison of Three Bioinformatics Pipelines for the Analysis of Preterm Gut Microbiota using 16S rRNA Gene Sequencing Data

    2015 · Journal of Proteomics & Bioinformatics · Plummer, Erica L., Twin, Jimmy

    136 cited

18. Alteration of the gut microbiota associated with childhood obesity by 16S rRNA gene sequencing

    2020 · PeerJ · Chen, Xiaowei, Sun, Haixiang, Jiang, Fei et al.

    136 cited

19. T-RFLP combined with principal component analysis and 16S rRNA gene sequencing: an effective strategy for comparison of fecal microbiota in infants of different ages

    2004 · Journal of Microbiological Methods · Wang, Mei, Ahrné, Siv, Antonsson, Martin et al.

    122 cited

20. Comparison of Illumina versus Nanopore 16S rRNA Gene Sequencing of the Human Nasal Microbiota

    2020 · Genes · Heikema, Astrid P., Horst-Kreft, Deborah, Boers, Stefan A. et al.

    119 cited

21. Chronic exposure to polyvinyl chloride microplastics induces liver injury and gut microbiota dysbiosis based on the integration of liver transcriptome profiles and full-length 16S rRNA sequencing data

    2022 · The Science of The Total Environment · Chen, Xuebing, Zhuang, Jingshen, Chen, Qianling et al.

    118 cited

22. Comparison of Microbiota in Patients Treated by Surgery or Chemotherapy by 16S rRNA Sequencing Reveals Potential Biomarkers for Colorectal Cancer Therapy

    2018 · Frontiers in Microbiology · Deng, Xingming, Li, Zhuofei, Guan, Li et al.

    110 cited

23. Sequencing of variable regions of the 16S rRNA gene for identification of lactic acid bacteria isolated from the intestinal microbiota of healthy salmonids

    2007 · Comparative Immunology Microbiology and Infectious Diseases · Balcázar, José Luís, Blas, Ignacio de, Ruiz‐Zarzuela, Imanol et al.

    105 cited

24. Microbiota profiling with long amplicons using Nanopore sequencing: full-length 16S rRNA gene and the 16S-ITS-23S of the rrn operon

    2019 · F1000Research · Cuscó, Anna, Catozzi, Carlotta, Viñes, Joaquim et al.

    103 cited

25. Bacterial Diversity of Intestinal Microbiota in Patients with Substance Use Disorders Revealed by 16S rRNA Gene Deep Sequencing

    2017 · Scientific Reports · Xu, Yu, Xie, Zhenrong, Wang, Huawei et al.

    102 cited

26. Fecal metabonomics combined with 16S rRNA gene sequencing to analyze the changes of gut microbiota in rats with kidney-yang deficiency syndrome and the intervention effect of You-gui pill

    2019 · Journal of Ethnopharmacology · Chen, Ruiqun, Wang, Jia, Zhan, Runhua et al.

    101 cited

27. Evaluating the association between body weight and the intestinal microbiota of weaned piglets via 16S rRNA sequencing

    2017 · Applied Microbiology and Biotechnology · Han, Geongoo, Lee, Jun-Yeong, Jin, Gwi-Deuk et al.

    100 cited

28. Characteristics of the gut microbiota in adult patients with type 1 and 2 diabetes based on the analysis of a fragment of 16S rRNA gene using next-generation sequencing.

    2018 · Polskie Archiwum Medycyny Wewnętrznej · Salamon, Dominika, Sroka-Oleksiak, Agnieszka, Kapusta, Przemysław et al.

    99 cited

29. Longitudinal 16S rRNA Sequencing Reveals Relationships among Alterations of Gut Microbiota and Nonalcoholic Fatty Liver Disease Progression in Mice

    2022 · Microbiology Spectrum · Zhuge, Aoxiang, Li, Shengjie, Lou, Pengcheng et al.

    94 cited

30. Use of 16S rRNA gene sequencing for prediction of new opportunistic pathogens in chicken ileal and cecal microbiota

    2019 · Poultry Science · Kollarcikova, Miloslava, Kubasová, Tereza, Karasová, Daniela et al.

    86 cited